Detailed information of matrix profile UN0725.1

  1. Home
  2. Matrix > UN0725.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: zip-11
Matrix ID: UN0725.1
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: Q9N5A8  
Source: 25905672
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

         
A [ 3 3 990 3 3 3 661 985 ]
C [ 3 3 3 990 3 3 332 5 ]
G [ 3 990 3 3 990 3 3 5 ]
T [ 990 3 3 3 3 990 3 5 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0725.1 UN0725 1 zip-11 Caenorhabditis elegans
Fos-related Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: