Detailed information of matrix profile UN0465.1

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Profile summary

Name: Pknox
Matrix ID: UN0465.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 226 234 231 333 248 389 208 118 34 14 123 7 881 271 254 206 237 218 208 225 ]
C [ 248 211 211 254 344 176 267 677 44 4 34 969 35 245 257 278 232 247 281 261 ]
G [ 254 276 349 230 180 281 294 122 6 974 15 16 37 256 221 223 268 254 235 239 ]
T [ 273 280 209 183 227 154 231 84 917 8 827 8 47 227 268 293 262 282 276 275 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0465.1 UN0465 1 Pknox Ciona intestinalis
TALE-type homeo domain factors Homeo domain factors
UN0465.2 UN0465 2 Pknox Ciona intestinalis
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: