Detailed information of matrix profile UN0465.1

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Profile summary

Name: Pknox
Matrix ID: UN0465.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 275 276 282 262 293 268 227 47 8 827 8 917 84 231 154 227 183 209 280 273 ]
C [ 239 235 254 268 223 221 256 37 16 15 974 6 122 294 281 180 230 349 276 254 ]
G [ 261 281 247 232 278 257 245 35 969 34 4 44 677 267 176 344 254 211 211 248 ]
T [ 225 208 218 237 206 254 271 881 7 123 14 34 118 208 389 248 333 231 234 226 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0465.1 UN0465 1 Pknox Ciona intestinalis
TALE-type homeo domain factors Homeo domain factors
UN0465.2 UN0465 2 Pknox Ciona intestinalis
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: