Detailed information of matrix profile MA2398.1

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Profile summary
Name: AS2
Matrix ID: MA2398.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 17913740
Uniprot ID: O04479  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 82 88 36 50 20 157 476 378 430 410 220 287 123 4 0 225 77 236 ]
C [ 726 36 302 936 0 41 250 22 50 232 118 116 813 4 148 626 22 41 ]
G [ 18 797 653 2 927 678 125 437 353 36 371 530 0 986 847 31 824 619 ]
T [ 173 77 6 11 52 123 148 161 166 321 289 66 63 4 4 116 75 102 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2398.1 MA2398 1 AS2 Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: