Detailed information of matrix profile MA2388.1

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Profile summary
Name: GATA1
Matrix ID: MA2388.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12504119
Uniprot ID: Q8LAU9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 805 1 1000 0 0 0 470 531 483 45 ]
C [ 55 0 0 0 988 297 28 32 60 292 ]
G [ 116 998 0 0 0 96 500 360 25 72 ]
T [ 21 0 0 1000 11 605 0 76 429 588 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2388.1 MA2388 1 GATA1 Arabidopsis thaliana
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: