Detailed information of matrix profile MA2344.1

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Profile summary
Name: REV
Matrix ID: MA2344.1
Class: Homeo domain factors
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 25395454
Uniprot ID: Q9SE43  
Source: GTRD
Comment:

Sequence logo

Frequency matrix

         
A [ 235 276 41 159 349 3 24 373 5 21 360 18 37 256 ]
C [ 54 32 27 194 11 5 318 5 11 39 5 36 27 40 ]
G [ 36 41 21 4 9 4 17 3 0 17 8 18 22 26 ]
T [ 60 36 296 28 16 373 26 4 369 308 12 313 299 63 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2344.1 MA2344 1 REV Arabidopsis thaliana
HD-ZIP Homeo domain factors
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1033.1

ChIP-seq Centrality
-log(P-value): 588.198

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1033.1

ChIP-seq Centrality
-log(P-value): 515.542

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: