Detailed information of matrix profile MA1707.1

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Profile summary
Name: DMRTA1
Matrix ID: MA1707.1
Class: DM-type intertwined zinc finger factors
Family: DMRT factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 17605809
Uniprot ID: Q5VZB9  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1860 1773 1096 383 0 1076 771 2671 2 2671 1392 588 ]
C [ 434 325 644 563 5 761 89 4 2671 0 299 650 ]
G [ 582 649 409 512 2671 1 0 15 0 39 587 585 ]
T [ 811 898 2671 2671 0 1595 2671 0 0 342 2671 2671 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1707.1 MA1707 1 DMRTA1 Homo sapiens
DMRT factors DM-type intertwined zinc finger factors
MA1707.2 MA1707 2 DMRTA1 Homo sapiens
DMRT factors DM-type intertwined zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: