Detailed information of matrix profile UN0782.1

  1. Home
  2. Matrix > UN0782.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: pdm2
Matrix ID: UN0782.1
Class: Homeo domain factors
Family: POU domain factors
Collection: UNVALIDATED
Taxon: Insects
Species: Drosophila melanogaster
Data Type: SELEX
Validation:
Uniprot ID: Q9VK71  
Source: 25779349
Comment:

Sequence logo

Frequency matrix

         
A [ 50 974 19 16 10 761 897 956 31 90 597 156 ]
C [ 81 0 47 5 816 11 19 12 30 102 115 160 ]
G [ 52 5 6 940 35 20 28 14 34 299 120 558 ]
T [ 816 20 926 37 137 207 54 16 904 506 165 123 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0782.1 UN0782 1 pdm2 Drosophila melanogaster
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: