Detailed information of matrix profile UN0734.1

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Profile summary

Name: lin-15B
Matrix ID: UN0734.1
Class: C2H2 zinc finger factors
Family: BED zinc finger factors
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation:
Uniprot ID: Q27395  
Source: GTRD
Comment: Class and TF information is inferred from the human ortholog to lin-15B, obtained from MARRVEL db.

Sequence logo

Frequency matrix

         
A [ 37 284 264 97 15 24 1 2 3 2 0 3 303 22 11 15 ]
C [ 258 20 10 50 199 8 326 2 331 32 334 192 10 132 122 9 ]
G [ 13 12 21 147 10 291 1 326 0 3 0 3 19 8 32 299 ]
T [ 28 20 41 42 112 13 8 6 2 299 2 138 4 174 171 13 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0734.1 UN0734 1 lin-15B Caenorhabditis elegans
BED zinc finger factors C2H2 zinc finger factors
     

-log(P-value) = 79.4627

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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