Detailed information of matrix profile UN0730.1

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Profile summary

Name: F16B12.6
Matrix ID: UN0730.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation:
Uniprot ID: Q93520  
Source: GTRD
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

         
A [ 42 59 20 10 6 6 43 1 22 14 295 51 373 ]
C [ 329 68 24 5 3 8 35 14 4 518 13 157 61 ]
G [ 66 373 487 9 526 14 27 12 510 3 218 171 40 ]
T [ 106 43 12 519 8 515 438 516 7 8 17 164 69 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0730.1 UN0730 1 F16B12.6 Caenorhabditis elegans
PAS domain factors Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 53.3575

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Description:

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