Detailed information of matrix profile UN0687.1

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Profile summary

Name: NGA4
Matrix ID: UN0687.1
Class: B3
Family: RAV
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation:
Uniprot ID: O82595  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 80 62 32 23 6 5 280 3 16 3 157 91 89 ]
C [ 72 43 54 19 6 276 3 2 1 6 5 58 45 ]
G [ 42 47 79 29 10 4 1 280 267 2 91 53 49 ]
T [ 93 135 122 216 265 2 3 2 3 276 34 85 104 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0687.1 UN0687 1 NGA4 Arabidopsis thaliana
RAV B3
UN0687.2 UN0687 2 NGA4 Arabidopsis thaliana
RAV B3
     

-log(P-value) = 162.274

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: