Detailed information of matrix profile UN0481.1

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Profile summary

Name: ZF-C2H2-7
Matrix ID: UN0481.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2H0  
Source: 31267468
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 261 199 286 361 343 143 69 924 29 32 23 104 874 873 29 33 244 281 345 356 274 157 ]
C [ 209 182 199 152 130 157 72 42 947 28 132 578 13 18 83 42 135 376 221 95 231 558 ]
G [ 314 375 295 213 340 307 807 19 8 61 56 131 104 80 144 856 232 62 95 407 230 132 ]
T [ 216 244 220 275 186 394 52 15 17 879 789 187 9 28 743 68 388 281 338 142 264 152 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0481.1 UN0481 1 ZF-C2H2-7 Ciona intestinalis
C2H2 zinc finger factors
UN0481.2 UN0481 2 ZF-C2H2-7 Ciona intestinalis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: