Detailed information of matrix profile UN0479.1

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Profile summary

Name: ZF-C2H2-35
Matrix ID: UN0479.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2H4  
Source: 31267468
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 198 223 122 204 328 30 37 17 558 782 150 120 17 975 8 162 99 86 172 213 304 226 ]
C [ 253 208 267 141 211 35 33 18 46 88 525 734 54 11 6 70 62 64 184 350 204 242 ]
G [ 261 235 154 87 189 14 822 956 178 94 95 25 846 7 977 676 83 64 464 243 225 248 ]
T [ 289 334 457 568 272 922 107 9 218 36 231 121 83 7 9 91 756 786 180 195 267 284 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0479.1 UN0479 1 ZF-C2H2-35 Ciona intestinalis
C2H2 zinc finger factors
UN0479.2 UN0479 2 ZF-C2H2-35 Ciona intestinalis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: