Detailed information of matrix profile UN0478.1

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Profile summary

Name: ZF-C2H2-15
Matrix ID: UN0478.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2K3  
Source: 31267468
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 210 173 165 197 138 178 93 20 27 10 17 14 23 81 134 186 210 205 218 211 ]
C [ 264 223 394 321 244 399 88 922 11 917 25 872 45 251 149 165 191 217 249 246 ]
G [ 315 366 229 196 311 101 547 17 146 24 58 14 20 76 333 168 206 210 255 236 ]
T [ 210 238 212 287 307 322 272 41 815 48 900 99 911 591 384 481 393 369 278 307 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0478.1 UN0478 1 ZF-C2H2-15 Ciona intestinalis
C2H2 zinc finger factors
UN0478.2 UN0478 2 ZF-C2H2-15 Ciona intestinalis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: