Detailed information of matrix profile UN0470.1

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Profile summary

Name: Srf
Matrix ID: UN0470.1
Class: MADS box factors
Family: Regulators of differentiation
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2R3  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 244 232 232 157 67 366 257 819 66 880 98 63 25 239 254 313 216 271 249 261 ]
C [ 195 209 188 581 643 196 146 26 53 12 51 14 31 235 262 219 221 235 248 252 ]
G [ 239 304 292 130 68 190 101 62 31 24 41 899 905 253 271 207 251 254 229 233 ]
T [ 321 255 288 133 222 248 497 93 850 84 810 24 39 273 212 261 312 240 274 254 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0470.1 UN0470 1 Srf Ciona intestinalis
Regulators of differentiation MADS box factors
UN0470.2 UN0470 2 Srf Ciona intestinalis
Regulators of differentiation MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: