Detailed information of matrix profile UN0459.1

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Profile summary

Name: NR2C1-2
Matrix ID: UN0459.1
Class: Nuclear receptors with C4 zinc fingers
Family: XR-related receptors (NR2)
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 189 189 368 267 345 62 84 42 55 890 776 859 52 16 16 45 687 341 293 238 253 157 ]
C [ 220 261 153 115 66 40 56 87 723 23 21 16 9 16 25 574 85 201 151 151 211 365 ]
G [ 317 302 224 466 521 818 676 78 97 59 113 111 917 888 121 104 177 208 325 431 327 194 ]
T [ 275 247 255 153 67 80 184 793 125 27 89 14 22 81 839 277 50 251 231 179 210 284 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0459.1 UN0459 1 NR2C1-2 Ciona intestinalis
XR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
UN0459.2 UN0459 2 NR2C1-2 Ciona intestinalis
XR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: