Detailed information of matrix profile UN0450.1

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Profile summary

Name: ESRR
Matrix ID: UN0450.1
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 208 35 170 413 243 416 20 61 892 10 24 9 12 38 513 291 333 113 166 618 ]
C [ 52 218 203 128 304 65 100 26 44 969 952 11 91 225 93 227 173 190 147 107 ]
G [ 33 277 474 224 221 211 31 903 18 10 12 12 13 580 280 277 200 128 514 154 ]
T [ 706 470 154 235 232 308 850 11 46 11 12 968 883 158 114 205 294 569 173 121 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0450.1 UN0450 1 ESRR Ciona intestinalis
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
UN0450.2 UN0450 2 ESRR Ciona intestinalis
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: