Detailed information of matrix profile MA2376.1

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Profile summary
Name: CAMTA5
Matrix ID: MA2376.1
Class: GCM domain factors
Family: CAMTA
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 17689537
Uniprot ID: O23463  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 886 26 463 0 16 53 240 245 220 310 238 731 126 445 86 125 ]
C [ 83 963 0 990 10 260 181 120 288 213 273 171 731 86 708 140 ]
G [ 20 0 500 0 930 305 148 141 95 135 181 31 20 380 95 595 ]
T [ 10 10 36 10 43 381 430 493 396 341 306 65 121 88 110 140 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2376.1 MA2376 1 CAMTA5 Arabidopsis thaliana
CAMTA GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Included Models:

GC Content: