Detailed information of matrix profile MA2186.1

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Profile summary
Name: tbx-38
Matrix ID: MA2186.1
Class: T-Box factors
Family: TBX6-related factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: yeast 1-hybrid
Validation: 25905672
Uniprot ID: Q9XVD5  
Source: 27777270
Comment:

Sequence logo

Frequency matrix

         
A [ 55 44 51 0 0 0 26 0 73 73 38 54 ]
C [ 0 0 4 15 0 0 17 14 0 0 30 7 ]
G [ 11 33 22 84 0 100 8 78 6 13 7 0 ]
T [ 33 22 22 0 100 0 47 7 20 13 23 38 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2186.1 MA2186 1 tbx-38 Caenorhabditis elegans
TBX6-related factors T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: