| Name: | SoxB2 |
| Matrix ID: | MA1916.1 |
| Class: | High-mobility group (HMG) domain factors |
| Family: | SOX-related factors |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 24680932 |
| Uniprot ID: | Q4H2S2 |
| Source: | 31267468 |
| Comment: |
| A [ | 358 | 343 | 331 | 306 | 297 | 374 | 379 | 694 | 946 | 10 | 955 | 968 | 100 | 376 | 251 | 276 | 299 | 268 | 275 | 277 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 167 | 180 | 197 | 209 | 214 | 190 | 147 | 102 | 14 | 919 | 19 | 9 | 20 | 64 | 226 | 269 | 242 | 232 | 220 | 200 | ] |
| G [ | 222 | 232 | 230 | 239 | 251 | 206 | 240 | 103 | 18 | 23 | 7 | 8 | 7 | 374 | 402 | 209 | 183 | 160 | 149 | 173 | ] |
| T [ | 254 | 245 | 242 | 245 | 239 | 230 | 233 | 101 | 22 | 48 | 19 | 16 | 874 | 186 | 121 | 246 | 276 | 339 | 356 | 350 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1916.1 | MA1916 | 1 | SoxB2 |
Ciona intestinalis
|
SOX-related factors | High-mobility group (HMG) domain factors |  |
| MA1916.2 | MA1916 | 2 | SoxB2 |
Ciona intestinalis
|
SOX-related factors | High-mobility group (HMG) domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: