| Name: | Six3/6 |
| Matrix ID: | MA1912.1 |
| Class: | Homeo domain factors |
| Family: | HD-SINE |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 18989625 |
| Uniprot ID: | |
| Source: | 31267468 |
| Comment: | No UniProt ID found. |
| A [ | 260 | 227 | 225 | 325 | 413 | 409 | 309 | 38 | 52 | 964 | 21 | 930 | 21 | 177 | 190 | 242 | 267 | 307 | 298 | 268 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 242 | 206 | 185 | 181 | 195 | 187 | 175 | 86 | 26 | 10 | 51 | 49 | 710 | 351 | 302 | 264 | 212 | 255 | 247 | 265 | ] |
| G [ | 222 | 248 | 348 | 174 | 159 | 145 | 208 | 42 | 890 | 9 | 9 | 12 | 72 | 290 | 265 | 234 | 184 | 172 | 186 | 203 | ] |
| T [ | 276 | 320 | 242 | 320 | 234 | 258 | 308 | 833 | 33 | 17 | 919 | 9 | 196 | 182 | 244 | 259 | 337 | 266 | 270 | 264 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1912.1 | MA1912 | 1 | Six3/6 |
Ciona intestinalis
|
HD-SINE | Homeo domain factors |  |
| MA1912.2 | MA1912 | 2 | Six3/6 |
Ciona intestinalis
|
HD-SINE | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: