| Name: | Otx |
| Matrix ID: | MA1908.1 |
| Class: | Homeo domain factors |
| Family: | Paired-related HD factors |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 25121599 |
| Uniprot ID: | Q4H303 |
| Source: | 31267468 |
| Comment: |
| A [ | 304 | 305 | 277 | 258 | 258 | 258 | 296 | 169 | 86 | 915 | 933 | 40 | 65 | 55 | 123 | 263 | 257 | 260 | 321 | 312 | 303 | 288 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 200 | 224 | 237 | 267 | 246 | 252 | 266 | 162 | 24 | 13 | 14 | 35 | 814 | 769 | 200 | 293 | 231 | 229 | 212 | 226 | 244 | 251 | ] |
| G [ | 216 | 202 | 210 | 231 | 272 | 276 | 232 | 96 | 15 | 32 | 25 | 89 | 61 | 77 | 548 | 219 | 192 | 185 | 183 | 191 | 193 | 192 | ] |
| T [ | 280 | 269 | 275 | 244 | 223 | 214 | 207 | 573 | 875 | 40 | 28 | 836 | 61 | 99 | 129 | 225 | 321 | 327 | 285 | 271 | 260 | 269 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1908.1 | MA1908 | 1 | Otx |
Ciona intestinalis
|
Paired-related HD factors | Homeo domain factors |  |
| MA1908.2 | MA1908 | 2 | Otx |
Ciona intestinalis
|
Paired-related HD factors | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: