Detailed information of matrix profile MA1666.1

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Profile summary
Name: HSFB2B
Matrix ID: MA1666.1
Class: Heat shock factors
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8689565
Uniprot ID: Q9T0D3  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 57 5 0 1 478 0 568 500 121 75 31 10 1 27 ]
C [ 35 10 586 115 23 3 3 8 123 302 20 4 583 145 ]
G [ 14 2 0 19 79 585 0 18 220 120 4 2 0 27 ]
T [ 482 571 2 453 8 0 17 62 124 91 533 572 4 389 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1666.1 MA1666 1 HSFB2B Arabidopsis thaliana
HSF Heat shock factors
MA1666.2 MA1666 2 HSFB2B Arabidopsis thaliana
HSF Heat shock factors
MA1666.3 MA1666 3 HSFB2B Arabidopsis thaliana
HSF Heat shock factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0673.1

ChIP-seq Centrality
-log(P-value): 3614.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0673.1

ChIP-seq Centrality
-log(P-value): 3650.12

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: