Detailed information of matrix profile MA1570.1

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Profile summary
Name: TFAP4
Matrix ID: MA1570.1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 9741833
Uniprot ID: Q01664  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 479 217 0 479 0 479 0 0 103 60 ]
C [ 130 144 479 0 220 149 0 3 14 210 ]
G [ 197 0 0 14 161 287 0 479 156 110 ]
T [ 39 129 0 0 479 0 479 0 206 479 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1570.1 MA1570 1 TFAP4 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0882.1

ChIP-seq Centrality
-log(P-value): 22954.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0882.1

ChIP-seq Centrality
-log(P-value): 22588.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: