Detailed information of matrix profile MA1455.1

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Profile summary
Name: dmrt99B
Matrix ID: MA1455.1
Class: DM-type intertwined zinc finger factors
Family: DMRT factors
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: HT-SELEX
Validation: 31133749
Uniprot ID: Q9VAI8  
Source: 25779349
Comment: DM proteins bind as dimers. PBM supports the monomer TGTATCAA.

Sequence logo

Frequency matrix

         
A [ 289 224 92 341 348 979 10 856 934 137 41 3 618 356 63 479 529 ]
C [ 150 201 38 288 85 4 955 8 26 21 12 4 35 11 825 155 117 ]
G [ 115 142 808 9 39 8 10 10 39 11 933 2 66 260 27 200 128 ]
T [ 445 431 60 360 526 7 23 124 0 829 12 989 279 371 82 164 224 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1455.1 MA1455 1 dmrt99B Drosophila melanogaster
DMRT factors DM-type intertwined zinc finger factors
MA1455.2 MA1455 2 dmrt99B Drosophila melanogaster
DMRT factors DM-type intertwined zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: