Detailed information of matrix profile MA0925.1

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Profile summary
Name: sma-4
Matrix ID: MA0925.1
Class: SMAD/NF-1 DNA-binding domain factors
Family: SMAD factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 16322555
Uniprot ID: P45897  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 217 142 110 0 1000 0 917 83 901 199 223 ]
C [ 217 256 836 785 0 0 0 917 33 300 223 ]
G [ 349 242 27 0 0 1000 0 0 33 228 223 ]
T [ 217 360 27 215 0 0 83 0 33 273 331 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0925.1 MA0925 1 sma-4 Caenorhabditis elegans
SMAD factors SMAD/NF-1 DNA-binding domain factors
MA0925.2 MA0925 2 sma-4 Caenorhabditis elegans
SMAD factors SMAD/NF-1 DNA-binding domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: