Detailed information of matrix profile MA0577.3

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Profile summary
Name: SPL3
Matrix ID: MA0577.3
Class: C3H(C),C2HC zinc fingers factors
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 10524240 16554053
Uniprot ID: P93015  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 200 108 11 2 942 7 75 34 760 237 340 ]
C [ 288 241 6 3 3 939 6 5 56 275 171 ]
G [ 143 85 928 10 3 1 856 872 15 122 226 ]
T [ 319 516 5 935 2 3 13 39 119 316 213 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0577.1 MA0577 1 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC zinc fingers factors
MA0577.2 MA0577 2 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC zinc fingers factors
MA0577.3 MA0577 3 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC zinc fingers factors
MA0577.4 MA0577 4 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC zinc fingers factors
     

-log(P-value) = 730.839

TFFM details

TFFM ID: TFFM0742.1

ChIP-seq Centrality
-log(P-value): 725.669

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0742.1

ChIP-seq Centrality
-log(P-value): 719.024

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: